Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein signal peptidase | DER08_09360 | Not Available | Positive | 2008662 - 2009267 | 22966.0 |
| dna repair protein rada | DER08_09365 | Not Available | Negative | 2009270 - 2010631 | 49829.2 |
| aspartate 1-decarboxylase | DER08_09370 | Not Available | Negative | 2010761 - 2011111 | 12908.4 |
| pantoate--beta-alanine ligase | DER08_09375 | Not Available | Negative | 2011126 - 2011974 | 32081.3 |
| glycogen synthase | DER08_09380 | Not Available | Positive | 2012081 - 2012887 | 30954.3 |
| duf4270 domain-containing protein | DER08_09385 | Not Available | Positive | 2012909 - 2014477 | 57415.2 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DER08_09390 | Not Available | Positive | 2014487 - 2016334 | 67825.6 |
| hypothetical protein | DER08_09395 | Not Available | Negative | 2016262 - 2017965 | 66218.0 |
| hypothetical protein | DER08_09400 | Not Available | Negative | 2018371 - 2018673 | 11749.4 |
| hypothetical protein | DER08_09405 | Not Available | Positive | 2018625 - 2021441 | 103029.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
