Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium transporter | DER08_09260 | Not Available | Positive | 1989588 - 1991156 | 58089.7 |
| glycerate kinase | DER08_09265 | Not Available | Positive | 1991163 - 1992299 | 40561.8 |
| phosphoheptose isomerase | DER08_09270 | Not Available | Positive | 1992303 - 1992818 | 19943.6 |
| colicin v production protein | DER08_09275 | Not Available | Negative | 1992883 - 1993386 | 18606.3 |
| hypothetical protein | DER08_09280 | Not Available | Positive | 1993522 - 1993878 | 14110.0 |
| phenylalanine--trna ligase subunit alpha | DER08_09285 | Not Available | Positive | 1994011 - 1995030 | 38854.4 |
| hypothetical protein | DER08_09290 | Not Available | Positive | 1995082 - 1995489 | 15493.8 |
| hypothetical protein | DER08_09295 | Not Available | Negative | 1995490 - 1995705 | 8234.95 |
| glycerol-3-phosphate dehydrogenase | DER08_09300 | Not Available | Negative | 1995717 - 1996712 | 36554.1 |
| nadh-dependent alcohol dehydrogenase | DER08_09305 | Not Available | Negative | 1996991 - 1998154 | 42951.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
