Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor | DER08_09160 | Not Available | Positive | 1965473 - 1968838 | 128451.0 |
| aspartate kinase | DER08_09165 | Not Available | Negative | 1968884 - 1969540 | 24583.8 |
| yran family protein | DER08_09170 | Not Available | Negative | 1969662 - 1970021 | 13680.4 |
| ld-carboxypeptidase | DER08_09175 | Not Available | Negative | 1970043 - 1970939 | 33038.0 |
| endonuclease | DER08_09180 | Not Available | Positive | 1971134 - 1972231 | 41634.6 |
| 3-hydroxyanthranilate 3,4-dioxygenase | DER08_09185 | Not Available | Positive | 1972274 - 1972813 | 20514.3 |
| serine/threonine protein phosphatase | DER08_09190 | Not Available | Negative | 1972816 - 1973541 | 27594.8 |
| nad(p)-dependent oxidoreductase | DER08_09195 | Not Available | Negative | 1973552 - 1974307 | 27302.8 |
| aldo/keto reductase | DER08_09200 | Not Available | Negative | 1974323 - 1975195 | 32769.5 |
| atpase | DER08_09205 | Not Available | Positive | 1975408 - 1976412 | 37640.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
