Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-succinylbenzoate synthase | DER08_00855 | Not Available | Positive | 180980 - 182017 | 39349.3 |
| cysteine desulfurase | DER08_00860 | Not Available | Negative | 182147 - 183271 | 41070.4 |
| hypothetical protein | DER08_00865 | Not Available | Positive | 183365 - 184327 | 34969.2 |
| dna mismatch repair protein muts | DER08_00870 | Not Available | Negative | 184428 - 184979 | 20840.0 |
| hypothetical protein | DER08_00875 | Not Available | Negative | 184969 - 185154 | 6979.75 |
| hypothetical protein | DER08_00880 | Not Available | Positive | 185259 - 185540 | 10581.4 |
| serine acetyltransferase | DER08_00885 | Not Available | Positive | 185705 - 186496 | 29186.2 |
| cysteine synthase b | DER08_00890 | Not Available | Positive | 186498 - 187385 | 32236.6 |
| acylhydrolase | DER08_00895 | Not Available | Positive | 187460 - 188095 | 23676.2 |
| rhodanese-like domain-containing protein | DER08_00900 | Not Available | Positive | 188258 - 188536 | 10191.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
