Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | DER08_08845 | Not Available | Negative | 1909223 - 1910266 | 38945.8 |
| rip metalloprotease rsep | DER08_08850 | Not Available | Positive | 1910475 - 1911818 | 50147.3 |
| Trna-asn | Not Available | Not Available | Positive | 1911903 - 1911979 | Not Available |
| mfs transporter | DER08_08860 | Not Available | Positive | 1912249 - 1913760 | 55628.5 |
| hypothetical protein | DER08_08865 | Not Available | Positive | 1914470 - 1914682 | 7931.13 |
| mercury transporter | DER08_08870 | Not Available | Positive | 1914875 - 1915738 | 32198.6 |
| copper oxidase | DER08_08875 | Not Available | Positive | 1915796 - 1918060 | 86099.5 |
| hypothetical protein | DER08_08885 | Not Available | Negative | 1918599 - 1918868 | 10316.2 |
| hypothetical protein | DER08_08890 | Not Available | Positive | 1919045 - 1919239 | 7438.83 |
| integrase | DER08_08895 | Not Available | Negative | 1919320 - 1919910 | 22791.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
