Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m1 | DER08_08745 | Not Available | Negative | 1887220 - 1889091 | 71036.0 |
| peptidase s8 | DER08_08750 | Not Available | Negative | 1889240 - 1890820 | 57087.0 |
| mbl fold metallo-hydrolase | DER08_08755 | Not Available | Negative | 1890887 - 1891747 | 32792.0 |
| iron-sulfur cluster assembly accessory protein | DER08_08760 | Not Available | Positive | 1891922 - 1892251 | 11812.0 |
| fe-s cluster assembly protein sufb | DER08_08765 | Not Available | Positive | 1892301 - 1893749 | 53971.9 |
| four helix bundle protein | DER08_08770 | Not Available | Positive | 1893781 - 1894128 | 13278.1 |
| fe-s cluster assembly atpase sufc | DER08_08775 | Not Available | Positive | 1894175 - 1894924 | 27638.3 |
| fe-s cluster assembly protein sufd | DER08_08780 | Not Available | Positive | 1894980 - 1896296 | 49441.9 |
| serine hydrolase | DER08_08785 | Not Available | Negative | 1896368 - 1897714 | 50526.0 |
| cysteine desulfurase csda | DER08_08790 | Not Available | Positive | 1897962 - 1899176 | 44477.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
