Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1294 domain-containing protein | DER08_08650 | Not Available | Positive | 1866197 - 1866478 | 11005.1 |
| ribose 5-phosphate isomerase b | DER08_08655 | Not Available | Negative | 1866472 - 1866903 | 15613.7 |
| ribonuclease r | DER08_08660 | Not Available | Positive | 1867714 - 1869894 | 83605.7 |
| duf2807 domain-containing protein | DER08_08665 | Not Available | Positive | 1869916 - 1870581 | 23835.8 |
| lysine transporter lyse | DER08_08670 | Not Available | Positive | 1870608 - 1871282 | 25015.0 |
| Trna-pseudo | Not Available | Not Available | Positive | 1871412 - 1871482 | Not Available |
| dihydroneopterin aldolase | DER08_08675 | Not Available | Negative | 1871575 - 1871934 | 13400.3 |
| glutamine--trna ligase | DER08_08680 | Not Available | Positive | 1872084 - 1874180 | 80623.4 |
| hypothetical protein | DER08_08685 | Not Available | Positive | 1874485 - 1874814 | 12029.3 |
| competence protein | DER08_08690 | Not Available | Positive | 1874837 - 1875187 | 12989.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
