Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | DER08_00805 | Not Available | Positive | 170729 - 170953 | 8616.5 |
| n-acetyltransferase | DER08_00810 | Not Available | Negative | 170959 - 171513 | 21460.9 |
| aldose epimerase | DER08_00815 | Not Available | Negative | 171522 - 172376 | 32327.2 |
| peptidase m1 | DER08_00820 | Not Available | Positive | 172520 - 174775 | 84759.2 |
| agmatine deiminase | DER08_00825 | Not Available | Negative | 174847 - 175887 | 39222.1 |
| acyltransferase | DER08_00830 | Not Available | Negative | 175890 - 176777 | 33233.4 |
| gntr family transcriptional regulator | DER08_00835 | Not Available | Positive | 176925 - 177779 | 32811.8 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | DER08_00840 | Not Available | Positive | 177884 - 178723 | 31143.1 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | DER08_00845 | Not Available | Positive | 178771 - 179721 | 35033.2 |
| hypothetical protein | DER08_00850 | Not Available | Positive | 179765 - 180973 | 45251.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
