Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DER08_08445 | Not Available | Positive | 1823804 - 1824313 | 18690.7 |
| hypothetical protein | DER08_08455 | Not Available | Negative | 1824618 - 1825442 | 30262.1 |
| hypothetical protein | DER08_08460 | Not Available | Negative | 1825527 - 1832024 | 224688.0 |
| hypothetical protein | DER08_08465 | Not Available | Positive | 1832195 - 1832380 | 7335.17 |
| recombinase reca | DER08_08470 | Not Available | Positive | 1832384 - 1833391 | 36240.6 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DER08_08475 | Not Available | Negative | 1833453 - 1834193 | 28589.5 |
| duf2975 domain-containing protein | DER08_08480 | Not Available | Positive | 1834384 - 1834920 | 19948.8 |
| transcriptional regulator | DER08_08485 | Not Available | Positive | 1834924 - 1835133 | 7560.35 |
| peptidase m23 | DER08_08490 | Not Available | Negative | 1835174 - 1836550 | 51816.7 |
| duf4292 domain-containing protein | DER08_08495 | Not Available | Negative | 1836571 - 1837320 | 28071.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
