Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | DER08_08345 | Not Available | Positive | 1800171 - 1801262 | 40484.2 |
| sam-dependent methyltransferase | DER08_08350 | Not Available | Positive | 1801265 - 1802446 | 44502.2 |
| hypothetical protein | DER08_08355 | Not Available | Positive | 1802449 - 1803015 | 21507.9 |
| d-alanyl-d-alanine dipeptidase | DER08_08360 | Not Available | Negative | 1803032 - 1803661 | 24310.1 |
| hypothetical protein | DER08_08365 | Not Available | Positive | 1803794 - 1805245 | 56251.8 |
| peptidase s24 | DER08_08370 | Not Available | Positive | 1805322 - 1805771 | 16963.4 |
| sos mutagenesis and repair protein umuc | DER08_08375 | Not Available | Positive | 1805771 - 1807030 | 47480.5 |
| Trna-arg | Not Available | Not Available | Positive | 1807089 - 1807162 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 1807173 - 1807250 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 1807270 - 1807353 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
