Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | DER08_08295 | Not Available | Negative | 1785550 - 1786722 | 43474.7 |
| organic solvent tolerance protein osta | DER08_08300 | Not Available | Positive | 1786805 - 1789540 | 103194.0 |
| reactive intermediate/imine deaminase | DER08_08305 | Not Available | Positive | 1789551 - 1789934 | 13710.6 |
| n-acetylglucosamine kinase | DER08_08310 | Not Available | Negative | 1789953 - 1790804 | 32489.1 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DER08_08315 | Not Available | Negative | 1790956 - 1791960 | 36064.2 |
| 6-phosphofructokinase | DER08_08320 | Not Available | Negative | 1792042 - 1793028 | 35185.3 |
| duf490 domain-containing protein | DER08_08325 | Not Available | Negative | 1793221 - 1797594 | 163437.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DER08_08330 | Not Available | Positive | 1797848 - 1798870 | 36950.7 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | DER08_08335 | Not Available | Positive | 1798875 - 1799582 | 26551.2 |
| rna methyltransferase | DER08_08340 | Not Available | Positive | 1799588 - 1800100 | 19080.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
