Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna helicase | DER08_08245 | Not Available | Positive | 1773093 - 1774343 | 46332.9 |
| dicarboxylate/amino acid:cation symporter | DER08_08250 | Not Available | Negative | 1774381 - 1775646 | 45512.8 |
| chorismate synthase | DER08_08255 | Not Available | Negative | 1775745 - 1776809 | 38429.8 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | DER08_08260 | Not Available | Negative | 1776994 - 1778127 | 42422.8 |
| phosphoesterase pa-phosphatase | DER08_08265 | Not Available | Negative | 1778192 - 1778794 | 22184.2 |
| beta-n-acetylglucosaminidase | DER08_08270 | Not Available | Negative | 1778800 - 1781808 | 112849.0 |
| abc transporter atpase | DER08_08275 | Not Available | Negative | 1781819 - 1782301 | 18621.9 |
| cob--com heterodisulfide reductase | DER08_08280 | Not Available | Negative | 1782337 - 1783128 | 28994.9 |
| fe-s oxidoreductase | DER08_08285 | Not Available | Negative | 1783179 - 1784507 | 49890.9 |
| mce family protein | DER08_08290 | Not Available | Negative | 1784513 - 1785505 | 35800.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
