Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | DER08_08135 | Not Available | Positive | 1752510 - 1753067 | 21065.1 |
| dna polymerase iii subunit gamma/tau | DER08_08145 | Not Available | Positive | 1753572 - 1754657 | 40420.6 |
| dna polymerase iii | DER08_08150 | Not Available | Positive | 1754996 - 1755337 | 13098.7 |
| exopolyphosphatase | DER08_08155 | Not Available | Negative | 1755347 - 1756237 | 33286.4 |
| polyphosphate kinase 1 | DER08_08160 | Not Available | Negative | 1756282 - 1758423 | 82231.9 |
| histidine phosphatase family protein | DER08_08165 | Not Available | Negative | 1758429 - 1758914 | 18494.2 |
| pyridoxamine 5'-phosphate oxidase | DER08_08170 | Not Available | Negative | 1759047 - 1759691 | 24654.0 |
| ribonuclease z | DER08_08175 | Not Available | Negative | 1759706 - 1760611 | 34388.4 |
| ribonuclease z | DER08_08180 | Not Available | Negative | 1760611 - 1760943 | 12284.8 |
| aspartate carbamoyltransferase | DER08_08185 | Not Available | Negative | 1761001 - 1761927 | 34183.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
