Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage-inducible protein dinb | DER08_08085 | Not Available | Negative | 1742290 - 1742805 | 19991.9 |
| phosphoenolpyruvate carboxylase | DER08_08090 | Not Available | Negative | 1742815 - 1745400 | 98402.4 |
| transcriptional regulator | DER08_08095 | Not Available | Negative | 1745500 - 1745979 | 18188.3 |
| peptidase m14 | DER08_08100 | Not Available | Negative | 1746060 - 1747214 | 44296.1 |
| acyltransferase | DER08_08105 | Not Available | Negative | 1747283 - 1747855 | 21557.5 |
| spermidine synthase | DER08_08110 | Not Available | Positive | 1747919 - 1748584 | 25524.3 |
| two pore domain potassium channel family protein | DER08_08115 | Not Available | Positive | 1748627 - 1749337 | 27801.8 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | DER08_08120 | Not Available | Negative | 1749338 - 1750063 | 27273.7 |
| atp-dependent endonuclease | DER08_08125 | Not Available | Negative | 1750137 - 1751558 | 54433.8 |
| duf3822 domain-containing protein | DER08_08130 | Not Available | Positive | 1751701 - 1752513 | 31402.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
