Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphorylase | DER08_08035 | Not Available | Positive | 1731950 - 1732816 | 32011.2 |
| abc transporter substrate-binding protein | DER08_08040 | Not Available | Positive | 1732824 - 1733672 | 31985.3 |
| hypothetical protein | DER08_08045 | Not Available | Negative | 1733653 - 1734792 | 43573.4 |
| multidrug abc transporter atp-binding protein | DER08_08050 | Not Available | Positive | 1734899 - 1736686 | 65955.4 |
| proline dehydrogenase | DER08_08055 | Not Available | Negative | 1736725 - 1737894 | 44252.0 |
| 3-dehydroquinate synthase | DER08_08060 | Not Available | Positive | 1737987 - 1739054 | 39999.2 |
| hypothetical protein | DER08_08065 | Not Available | Positive | 1739113 - 1739292 | 7060.78 |
| arginine decarboxylase | DER08_08070 | Not Available | Positive | 1739348 - 1740745 | 54330.8 |
| deoxyhypusine synthase | DER08_08075 | Not Available | Positive | 1740831 - 1741802 | 36734.0 |
| dna primase | DER08_08080 | Not Available | Positive | 1741816 - 1742220 | 15422.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
