Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase | DER08_07985 | Not Available | Negative | 1718750 - 1720657 | 71565.4 |
| ketol-acid reductoisomerase | DER08_07990 | Not Available | Negative | 1721051 - 1722523 | 53653.4 |
| acetolactate synthase small subunit | DER08_07995 | Not Available | Negative | 1722538 - 1723062 | 20151.4 |
| biosynthetic-type acetolactate synthase large subunit | DER08_08000 | Not Available | Negative | 1723067 - 1724752 | 61267.1 |
| dihydroxy-acid dehydratase | DER08_08005 | Not Available | Negative | 1724794 - 1726467 | 58977.3 |
| 3-isopropylmalate dehydrogenase | DER08_08010 | Not Available | Negative | 1726522 - 1727637 | 40902.1 |
| 2-isopropylmalate synthase | DER08_08015 | Not Available | Negative | 1727654 - 1728817 | 42132.4 |
| hypothetical protein | DER08_08020 | Not Available | Positive | 1728971 - 1730515 | 61966.8 |
| flavonol synthase | DER08_08025 | Not Available | Positive | 1730597 - 1731550 | 35980.8 |
| translation initiation factor sui1-related protein | DER08_08030 | Not Available | Positive | 1731559 - 1731891 | 12592.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
