Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DER08_00755 | Not Available | Negative | 162290 - 163219 | 35622.5 |
| exonuclease | DER08_00760 | Not Available | Negative | 163316 - 164677 | 51857.9 |
| four helix bundle protein | DER08_00765 | Not Available | Negative | 164778 - 165146 | 14116.0 |
| yggs family pyridoxal phosphate-dependent enzyme | DER08_00770 | Not Available | Negative | 165219 - 165884 | 25067.4 |
| 3-hydroxybutyryl-coa dehydrogenase | DER08_00775 | Not Available | Negative | 165898 - 166785 | 31906.1 |
| oxidoreductase | DER08_00780 | Not Available | Negative | 166793 - 167761 | 35930.2 |
| protein-l-isoaspartate o-methyltransferase | DER08_00785 | Not Available | Positive | 167905 - 168546 | 23765.2 |
| dna-binding protein | DER08_00790 | Not Available | Negative | 168573 - 169622 | 40294.9 |
| ssra-binding protein | DER08_00795 | Not Available | Negative | 169690 - 170142 | 17318.1 |
| phosphoglycerate mutase | DER08_00800 | Not Available | Negative | 170196 - 170681 | 18721.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
