Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rubrerythrin family protein | DER08_07935 | Not Available | Negative | 1704552 - 1705670 | 39391.6 |
| efflux transporter periplasmic adaptor subunit | DER08_07940 | Not Available | Negative | 1705677 - 1706798 | 41695.7 |
| cusa/czca family heavy metal efflux rnd transporter | DER08_07945 | Not Available | Negative | 1706805 - 1711139 | 161670.0 |
| two-component sensor histidine kinase | DER08_07950 | Not Available | Negative | 1711222 - 1712610 | 52803.4 |
| dna-binding response regulator | DER08_07955 | Not Available | Negative | 1712614 - 1713276 | 25316.8 |
| hypothetical protein | DER08_07960 | Not Available | Negative | 1713295 - 1714794 | 56219.8 |
| arginine decarboxylase | DER08_07965 | Not Available | Negative | 1714809 - 1715021 | 7616.22 |
| thiamine biosynthesis protein apbe | DER08_07970 | Not Available | Negative | 1715028 - 1716011 | 35834.5 |
| thioredoxin family protein | DER08_07975 | Not Available | Negative | 1716008 - 1716442 | 16423.7 |
| sulfatase | DER08_07980 | Not Available | Positive | 1716606 - 1718702 | 79638.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
