Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase | DER08_07885 | Not Available | Negative | 1694711 - 1695310 | 22488.6 |
| imidazole glycerol phosphate synthase subunit hisf | DER08_07890 | Not Available | Negative | 1695347 - 1696102 | 27169.7 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DER08_07895 | Not Available | Negative | 1696151 - 1696879 | 26345.6 |
| imidazole glycerol phosphate synthase subunit hish | DER08_07900 | Not Available | Negative | 1696984 - 1697571 | 21794.1 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase | DER08_07905 | Not Available | Negative | 1697581 - 1698714 | 42968.2 |
| histidinol-phosphate transaminase | DER08_07910 | Not Available | Negative | 1698719 - 1699771 | 39257.1 |
| histidinol dehydrogenase | DER08_07915 | Not Available | Negative | 1699761 - 1701053 | 46131.2 |
| atp phosphoribosyltransferase | DER08_07920 | Not Available | Negative | 1701075 - 1701932 | 31100.8 |
| phosphoenolpyruvate carboxykinase (atp) | DER08_07925 | Not Available | Negative | 1702216 - 1703823 | 60258.8 |
| hypothetical protein | DER08_07930 | Not Available | Negative | 1704038 - 1704529 | 17995.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
