Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ap endonuclease | DER08_07835 | Not Available | Positive | 1684072 - 1685124 | 39594.7 |
| cytochrome c552 | DER08_07840 | Not Available | Positive | 1685137 - 1685502 | 13384.5 |
| oxidoreductase | DER08_07845 | Not Available | Positive | 1685539 - 1686993 | 53992.3 |
| duf1080 domain-containing protein | DER08_07850 | Not Available | Positive | 1687005 - 1687730 | 26853.1 |
| mfs transporter | DER08_07855 | Not Available | Positive | 1687771 - 1689000 | 45055.5 |
| hydroxypyruvate isomerase | DER08_07860 | Not Available | Positive | 1689007 - 1689897 | 33327.4 |
| sugar phosphate isomerase/epimerase | DER08_07865 | Not Available | Positive | 1689915 - 1690793 | 32740.0 |
| phytanoyl-coa dioxygenase | DER08_07870 | Not Available | Negative | 1690864 - 1691844 | 38050.9 |
| peptidase m1 | DER08_07875 | Not Available | Negative | 1691942 - 1693573 | 62579.1 |
| alkaline phosphatase | DER08_07880 | Not Available | Negative | 1693584 - 1694603 | 38786.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
