Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | DER08_07785 | Not Available | Negative | 1673038 - 1673634 | 22844.6 |
| nucleotidyltransferase | DER08_07790 | Not Available | Negative | 1673637 - 1675556 | 72115.4 |
| dead/deah box helicase | DER08_07795 | Not Available | Negative | 1675761 - 1677092 | 49195.1 |
| dead/deah box helicase | DER08_07800 | Not Available | Negative | 1677124 - 1678662 | 59297.0 |
| hypothetical protein | DER08_07805 | Not Available | Negative | 1678769 - 1679296 | 20937.3 |
| hypothetical protein | DER08_07810 | Not Available | Positive | 1679402 - 1679674 | 10242.3 |
| glyoxalase | DER08_07815 | Not Available | Positive | 1679677 - 1680063 | 14816.0 |
| twin-arginine translocation pathway signal protein | DER08_07820 | Not Available | Positive | 1680587 - 1681147 | 20186.3 |
| gmc family oxidoreductase | DER08_07825 | Not Available | Positive | 1681188 - 1682894 | 64693.1 |
| oxidoreductase | DER08_07830 | Not Available | Positive | 1682907 - 1684070 | 42359.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
