Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1697 domain-containing protein | DER08_07630 | Not Available | Positive | 1643495 - 1644043 | 20464.9 |
| hypothetical protein | DER08_07635 | Not Available | Negative | 1644047 - 1644568 | 19844.8 |
| hypothetical protein | DER08_07640 | Not Available | Positive | 1644676 - 1645443 | 27816.1 |
| atp-dependent dna helicase | DER08_07645 | Not Available | Positive | 1645548 - 1647884 | 88904.7 |
| threonylcarbamoyl-amp synthase | DER08_07650 | Not Available | Positive | 1647899 - 1648519 | 22755.4 |
| hypothetical protein | DER08_07655 | Not Available | Negative | 1648613 - 1649446 | 30345.0 |
| dtdp-rha--alpha-d-glcnac-pyrophosphate polyprenol alpha-3-l-rhamnosyltransferase | DER08_07660 | Not Available | Negative | 1649500 - 1650501 | 38380.1 |
| restriction endonuclease subunit r | DER08_07665 | Not Available | Negative | 1650502 - 1650957 | 17973.5 |
| dna polymerase iii subunit delta | DER08_07670 | Not Available | Positive | 1651021 - 1652022 | 37942.1 |
| hypothetical protein | DER08_07675 | Not Available | Positive | 1652069 - 1652251 | 6348.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
