Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DER08_07580 | Not Available | Positive | 1627360 - 1628613 | 46871.6 |
| 30s ribosomal protein s1 | DER08_07585 | Not Available | Positive | 1628918 - 1630696 | 66043.6 |
| phenylalanine--trna ligase subunit beta | DER08_07590 | Not Available | Negative | 1630842 - 1633262 | 89541.6 |
| proline iminopeptidase | DER08_07595 | Not Available | Negative | 1633355 - 1634365 | 38283.4 |
| hypothetical protein | DER08_07600 | Not Available | Negative | 1634383 - 1635246 | 33422.7 |
| transporter | DER08_07605 | Not Available | Negative | 1635254 - 1636564 | 48486.6 |
| acriflavin resistance protein | DER08_07610 | Not Available | Negative | 1636567 - 1639662 | 113725.0 |
| efflux transporter periplasmic adaptor subunit | DER08_07615 | Not Available | Negative | 1639663 - 1640718 | 37829.2 |
| atp-dependent dna helicase recg | DER08_07620 | Not Available | Negative | 1640816 - 1642924 | 80099.0 |
| yhch/yjgk/yial family protein | DER08_07625 | Not Available | Positive | 1643004 - 1643450 | 17086.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
