Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | DER08_07530 | Not Available | Positive | 1614991 - 1615575 | 21688.1 |
| dihydrouridine synthase | DER08_07535 | Not Available | Negative | 1615636 - 1616580 | 36224.8 |
| n-acetyltransferase | DER08_07540 | Not Available | Negative | 1616614 - 1617111 | 18671.5 |
| thioredoxin | DER08_07545 | Not Available | Negative | 1617111 - 1618337 | 47191.8 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | DER08_07550 | Not Available | Positive | 1618474 - 1620129 | 61423.9 |
| peptidase m28 | DER08_07555 | Not Available | Negative | 1620163 - 1621515 | 50304.6 |
| alpha/beta hydrolase | DER08_07560 | Not Available | Negative | 1621557 - 1622426 | 32059.3 |
| mfs transporter | DER08_07565 | Not Available | Positive | 1622546 - 1623871 | 49252.9 |
| endopeptidase la | DER08_07570 | Not Available | Positive | 1624002 - 1626455 | 91890.0 |
| (d)cmp kinase | DER08_07575 | Not Available | Positive | 1626597 - 1627286 | 25748.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
