Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase tatd | DER08_07480 | Not Available | Positive | 1604229 - 1604888 | 25186.3 |
| trna threonylcarbamoyladenosine dehydratase | DER08_07485 | Not Available | Positive | 1604917 - 1605636 | 26439.2 |
| abc transporter atp-binding protein | DER08_07490 | Not Available | Positive | 1605656 - 1606312 | 24788.3 |
| dihydrolipoamide dehydrogenase | DER08_07495 | Not Available | Positive | 1606371 - 1607216 | 31238.3 |
| sodium:solute symporter | DER08_07500 | Not Available | Negative | 1607269 - 1608993 | 64922.9 |
| mechanosensitive ion channel protein mscs | DER08_07505 | Not Available | Negative | 1609136 - 1609675 | 20057.0 |
| septum formation protein maf | DER08_07510 | Not Available | Negative | 1609680 - 1610267 | 22182.2 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | DER08_07515 | Not Available | Negative | 1610279 - 1610806 | 19449.2 |
| duf2520 domain-containing protein | DER08_07520 | Not Available | Negative | 1610790 - 1611551 | 27627.0 |
| cytochrome c biogenesis protein | DER08_07525 | Not Available | Positive | 1611707 - 1614895 | 120889.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
