Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent metalloprotease | DER08_00705 | Not Available | Negative | 150357 - 152918 | 95595.1 |
| magnesium and cobalt transport protein cora | DER08_00710 | Not Available | Positive | 153191 - 154261 | 41884.6 |
| alpha-glucosidase | DER08_00715 | Not Available | Positive | 154316 - 156415 | 78970.6 |
| peptidase m28 family protein | DER08_00720 | Not Available | Positive | 156515 - 157891 | 50343.0 |
| hypothetical protein | DER08_00725 | Not Available | Negative | 157934 - 158773 | 31866.8 |
| 3-deoxy-8-phosphooctulonate synthase | DER08_00730 | Not Available | Negative | 158791 - 159609 | 29969.1 |
| ycei family protein | DER08_00735 | Not Available | Negative | 159746 - 160312 | 20183.3 |
| nad(p)h-dependent oxidoreductase | DER08_00740 | Not Available | Negative | 160338 - 160970 | 23466.1 |
| marr family transcriptional regulator | DER08_00745 | Not Available | Negative | 160986 - 161441 | 17793.0 |
| acyl-[acyl-carrier-protein] thioesterase | DER08_00750 | Not Available | Negative | 161541 - 162281 | 28455.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
