Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_07330 | Not Available | Positive | 1575621 - 1576145 | 20268.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | DER08_07335 | Not Available | Positive | 1576147 - 1577028 | 31635.5 |
| outer membrane protein assembly factor bamd | DER08_07340 | Not Available | Positive | 1577167 - 1577961 | 30331.3 |
| hypothetical protein | DER08_07345 | Not Available | Positive | 1577970 - 1578287 | 12293.5 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | DER08_07350 | Not Available | Positive | 1578298 - 1579539 | 44580.0 |
| duf4835 domain-containing protein | DER08_07355 | Not Available | Positive | 1579532 - 1580416 | 32970.8 |
| dna repair protein recn | DER08_07360 | Not Available | Positive | 1580442 - 1582094 | 61328.7 |
| bifunctional nadh-specific enoyl-acp reductase/trans-2-enoyl-coa reductase | DER08_07365 | Not Available | Positive | 1582151 - 1583341 | 42834.0 |
| glycosyl transferase family 2 | DER08_07370 | Not Available | Positive | 1583483 - 1584481 | 38294.0 |
| dephospho-coa kinase | DER08_07375 | Not Available | Positive | 1584485 - 1585066 | 21814.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
