Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triose-phosphate isomerase | DER08_07230 | Not Available | Negative | 1559355 - 1560107 | 27183.2 |
| alkyl hydroperoxide reductase | DER08_07235 | Not Available | Negative | 1560138 - 1560635 | 18528.5 |
| doxx family protein | DER08_07240 | Not Available | Negative | 1560756 - 1561865 | 41994.1 |
| hypothetical protein | DER08_07245 | Not Available | Negative | 1561890 - 1562423 | 20471.7 |
| dihydropteroate synthase | DER08_07250 | Not Available | Positive | 1562513 - 1563337 | 30168.9 |
| hypothetical protein | DER08_07255 | Not Available | Positive | 1563334 - 1563900 | 21688.2 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DER08_07260 | Not Available | Negative | 1563943 - 1564416 | 17956.8 |
| hypothetical protein | DER08_07265 | Not Available | Negative | 1564437 - 1564877 | 15287.5 |
| carboxylating nicotinate-nucleotide diphosphorylase | DER08_07270 | Not Available | Positive | 1565038 - 1565895 | 31385.7 |
| ribonuclease bn | DER08_07275 | Not Available | Positive | 1565897 - 1566826 | 34847.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
