Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DER08_07180 | Not Available | Positive | 1549928 - 1550359 | 16481.1 |
| l-serine ammonia-lyase | DER08_07185 | Not Available | Negative | 1550361 - 1551716 | 48821.1 |
| hypothetical protein | DER08_07190 | Not Available | Positive | 1551891 - 1554395 | 94813.4 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | DER08_07195 | Not Available | Negative | 1554451 - 1554900 | 17041.8 |
| yeee/yede family protein | DER08_07200 | Not Available | Positive | 1555056 - 1555613 | 19889.8 |
| transporter | DER08_07205 | Not Available | Positive | 1555616 - 1556029 | 14988.1 |
| lysoplasmalogenase | DER08_07210 | Not Available | Negative | 1556077 - 1556748 | 25025.5 |
| sterol desaturase | DER08_07215 | Not Available | Negative | 1556761 - 1558026 | 48874.3 |
| clp protease clps | DER08_07220 | Not Available | Negative | 1558101 - 1558376 | 10296.3 |
| 50s ribosomal protein l11 methyltransferase | DER08_07225 | Not Available | Negative | 1558412 - 1559245 | 31775.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
