Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna lysidine(34) synthetase tils | DER08_07130 | Not Available | Positive | 1534954 - 1536267 | 50992.6 |
| thiol:disulfide interchange protein | DER08_07135 | Not Available | Positive | 1536264 - 1538273 | 73737.1 |
| ammonia channel protein | DER08_07140 | Not Available | Negative | 1538386 - 1539711 | 46769.7 |
| amidohydrolase | DER08_07145 | Not Available | Negative | 1539981 - 1541282 | 47247.6 |
| amidohydrolase | DER08_07150 | Not Available | Negative | 1541316 - 1544303 | 111683.0 |
| magnesium chelatase | DER08_07155 | Not Available | Positive | 1544497 - 1546032 | 56399.9 |
| hypothetical protein | DER08_07160 | Not Available | Negative | 1546029 - 1546814 | 28986.9 |
| aldehyde dehydrogenase | DER08_07165 | Not Available | Negative | 1546855 - 1548183 | 49657.1 |
| rna pseudouridine synthase | DER08_07170 | Not Available | Negative | 1548258 - 1548950 | 25985.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | DER08_07175 | Not Available | Negative | 1549007 - 1549825 | 29569.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
