Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase | DER08_07080 | Not Available | Negative | 1519128 - 1520720 | 58851.5 |
| mfs transporter | DER08_07085 | Not Available | Negative | 1520729 - 1522000 | 47498.9 |
| glycosyl hydrolase | DER08_07090 | Not Available | Negative | 1522011 - 1523558 | 59942.7 |
| anhydro-n-acetylmuramic acid kinase | DER08_07095 | Not Available | Negative | 1523635 - 1524843 | 44034.6 |
| sodium:solute symporter | DER08_07100 | Not Available | Negative | 1524855 - 1526363 | 56186.7 |
| fad-binding oxidoreductase | DER08_07105 | Not Available | Positive | 1526540 - 1529452 | 107658.0 |
| amino acid permease | DER08_07110 | Not Available | Positive | 1529534 - 1531447 | 69988.1 |
| dihydrolipoyl dehydrogenase | DER08_07115 | Not Available | Positive | 1531638 - 1533041 | 49694.8 |
| doxx family protein | DER08_07120 | Not Available | Negative | 1533107 - 1533481 | 13769.5 |
| aminodeoxychorismate synthase component i | DER08_07125 | Not Available | Positive | 1533640 - 1534926 | 49342.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
