Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylcrotonoyl-coa carboxylase | DER08_06980 | Not Available | Negative | 1499134 - 1500762 | 59076.1 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DER08_06985 | Not Available | Negative | 1500861 - 1501859 | 34733.7 |
| peptide chain release factor 2 | DER08_06990 | Not Available | Negative | 1502001 - 1503099 | 41616.4 |
| threonine aldolase | DER08_06995 | Not Available | Positive | 1503188 - 1504213 | 37712.7 |
| glyoxalase | DER08_07000 | Not Available | Positive | 1504216 - 1504896 | 25896.7 |
| nucleoid-associated protein, ybab/ebfc family | DER08_07005 | Not Available | Negative | 1504898 - 1505218 | 11974.6 |
| oligopeptidase b | DER08_07010 | Not Available | Positive | 1505291 - 1507426 | 81899.7 |
| cystathionine beta-synthase | DER08_07015 | Not Available | Positive | 1507499 - 1508539 | 38492.4 |
| yebc/pmpr family dna-binding transcriptional regulator | DER08_07020 | Not Available | Negative | 1508612 - 1509322 | 26660.6 |
| glycine cleavage system aminomethyltransferase gcvt | DER08_07025 | Not Available | Negative | 1509380 - 1510462 | 39352.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
