Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome small subunit-dependent gtpase a | DER08_06825 | Not Available | Positive | 1468363 - 1469340 | 36840.8 |
| d-tyrosyl-trna(tyr) deacylase | DER08_06830 | Not Available | Positive | 1469340 - 1469792 | 16396.0 |
| pyrophosphatase | DER08_06835 | Not Available | Positive | 1469792 - 1470118 | 12395.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DER08_06840 | Not Available | Positive | 1470200 - 1471426 | 44359.5 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DER08_06845 | Not Available | Positive | 1471593 - 1472642 | 40045.0 |
| hypothetical protein | DER08_06850 | Not Available | Negative | 1472723 - 1472905 | 6715.3 |
| kynureninase | DER08_06855 | Not Available | Positive | 1473019 - 1474296 | 48495.4 |
| flavin oxidoreductase | DER08_06860 | Not Available | Negative | 1474305 - 1474943 | 24010.6 |
| penicillin acylase family protein | DER08_06865 | Not Available | Positive | 1475080 - 1477470 | 89567.6 |
| kynurenine 3-monooxygenase | DER08_06870 | Not Available | Positive | 1477530 - 1478873 | 50874.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
