Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siroheme synthase | DER08_06775 | Not Available | Positive | 1456064 - 1456648 | 22261.3 |
| ferredoxin--nadp(+) reductase | DER08_06780 | Not Available | Positive | 1456751 - 1457803 | 38324.3 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | DER08_06785 | Not Available | Positive | 1458102 - 1459088 | 36332.3 |
| methionine synthase | DER08_06790 | Not Available | Positive | 1459128 - 1461803 | 99507.9 |
| methylenetetrahydrofolate reductase | DER08_06795 | Not Available | Positive | 1461872 - 1462828 | 35757.2 |
| gliding motility-associated abc transporter atp-binding subunit glda | DER08_06800 | Not Available | Negative | 1462877 - 1463773 | 33156.8 |
| prephenate dehydratase | DER08_06805 | Not Available | Positive | 1464167 - 1464994 | 31064.5 |
| aminotransferase | DER08_06810 | Not Available | Positive | 1465042 - 1466187 | 42426.3 |
| prephenate dehydrogenase | DER08_06815 | Not Available | Positive | 1466287 - 1467144 | 31422.2 |
| 3-deoxy-7-phosphoheptulonate synthase | DER08_06820 | Not Available | Positive | 1467156 - 1468238 | 40366.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
