Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_06470 | Not Available | Negative | 1384652 - 1384873 | 7909.93 |
| mfs transporter | DER08_06475 | Not Available | Negative | 1384906 - 1386474 | 57275.4 |
| hypothetical protein | DER08_06480 | Not Available | Negative | 1386511 - 1387833 | 47897.7 |
| hypothetical protein | DER08_06485 | Not Available | Negative | 1387900 - 1388319 | 16407.2 |
| Trna-phe | Not Available | Not Available | Positive | 1388567 - 1388649 | Not Available |
| type iii pantothenate kinase | DER08_06495 | Not Available | Positive | 1388748 - 1389482 | 27261.3 |
| hypothetical protein | DER08_06500 | Not Available | Positive | 1389475 - 1390725 | 45309.7 |
| lps export abc transporter periplasmic protein lptc | DER08_06505 | Not Available | Positive | 1390800 - 1391315 | 19349.9 |
| peptidylprolyl isomerase | DER08_06510 | Not Available | Positive | 1391679 - 1393775 | 75879.7 |
| ghmp kinase | DER08_06515 | Not Available | Negative | 1393852 - 1394766 | 33690.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
