Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diphosphomevalonate decarboxylase | DER08_06370 | Not Available | Negative | 1354160 - 1355251 | 40993.9 |
| sensory protein tspo | DER08_06375 | Not Available | Positive | 1355324 - 1355800 | 17995.6 |
| aminoacetone oxidase family fad-binding enzyme | DER08_06380 | Not Available | Negative | 1355814 - 1357043 | 45378.6 |
| alpha-amlyase | DER08_06385 | Not Available | Negative | 1357122 - 1358780 | 62429.2 |
| alpha-amlyase | DER08_06390 | Not Available | Negative | 1358789 - 1360624 | 70529.0 |
| esterase | DER08_06395 | Not Available | Negative | 1360636 - 1361550 | 34875.6 |
| family 65 glycosyl hydrolase | DER08_06400 | Not Available | Negative | 1361612 - 1363915 | 87976.4 |
| beta-phosphoglucomutase | DER08_06405 | Not Available | Negative | 1363975 - 1364631 | 23984.5 |
| mfs transporter | DER08_06410 | Not Available | Negative | 1364635 - 1365972 | 49093.5 |
| laci family transcriptional regulator | DER08_06415 | Not Available | Negative | 1366164 - 1367189 | 38078.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
