Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | DER08_06315 | Not Available | Positive | 1343122 - 1343916 | 29856.3 |
| duf423 domain-containing protein | DER08_06320 | Not Available | Negative | 1343951 - 1344337 | 14153.8 |
| regulatory sensor-transducer, blar1/mecr1 family protein | DER08_06325 | Not Available | Negative | 1344474 - 1345934 | 56185.0 |
| penicillinase repressor | DER08_06330 | Not Available | Negative | 1345931 - 1346302 | 14427.3 |
| dipeptidase | DER08_06335 | Not Available | Negative | 1346558 - 1347946 | 50876.6 |
| Trna-leu | Not Available | Not Available | Positive | 1348055 - 1348139 | Not Available |
| hypothetical protein | DER08_06345 | Not Available | Negative | 1348173 - 1348895 | 27474.1 |
| peptidase m3 | DER08_06350 | Not Available | Positive | 1349015 - 1351156 | 80366.6 |
| rrna pseudouridine synthase | DER08_06355 | Not Available | Negative | 1351224 - 1352117 | 33399.3 |
| ubiquinone biosynthesis protein ubia | DER08_06360 | Not Available | Negative | 1352232 - 1353188 | 36792.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
