Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | DER08_06265 | Not Available | Negative | 1330732 - 1332255 | 56285.2 |
| 3-isopropylmalate dehydratase small subunit | DER08_06270 | Not Available | Negative | 1332392 - 1332988 | 22004.8 |
| 3-isopropylmalate dehydratase large subunit | DER08_06275 | Not Available | Negative | 1333052 - 1334446 | 50177.9 |
| dna polymerase iii subunit alpha | DER08_06280 | Not Available | Positive | 1335090 - 1339631 | 172026.0 |
| thioredoxin | DER08_06285 | Not Available | Positive | 1339750 - 1340067 | 11359.7 |
| hypothetical protein | DER08_06290 | Not Available | Negative | 1340298 - 1340336 | 1430.84 |
| Trna-asp | Not Available | Not Available | Positive | 1340463 - 1340539 | Not Available |
| hypothetical protein | DER08_06300 | Not Available | Positive | 1340888 - 1341364 | 18336.4 |
| crossover junction endodeoxyribonuclease ruvc | DER08_06305 | Not Available | Positive | 1341389 - 1341940 | 20397.0 |
| coproporphyrinogen iii oxidase | DER08_06310 | Not Available | Positive | 1341953 - 1343098 | 43274.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
