Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_06215 | Not Available | Positive | 1323407 - 1323646 | 8675.5 |
| ferredoxin | DER08_06220 | Not Available | Positive | 1323699 - 1324016 | 11571.0 |
| lysophospholipase | DER08_06225 | Not Available | Negative | 1324046 - 1324768 | 26555.7 |
| heme oxygenase | DER08_06230 | Not Available | Negative | 1324827 - 1325609 | 29789.6 |
| acyl-coa dehydrogenase | DER08_06235 | Not Available | Negative | 1325700 - 1326878 | 43560.4 |
| trna (adenine-n(6)-)-methyltransferase | DER08_06240 | Not Available | Negative | 1326957 - 1327670 | 27123.1 |
| 16s rrna processing protein rimm | DER08_06245 | Not Available | Negative | 1327729 - 1328253 | 20039.2 |
| 30s ribosomal protein s16 | DER08_06250 | Not Available | Negative | 1328269 - 1328925 | 23154.1 |
| rna-binding protein | DER08_06255 | Not Available | Positive | 1329165 - 1329512 | 12369.2 |
| 3-isopropylmalate dehydrogenase | DER08_06260 | Not Available | Negative | 1329583 - 1330644 | 38679.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
