Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | DER08_06165 | Not Available | Positive | 1313000 - 1315444 | 90551.0 |
| large conductance mechanosensitive channel protein mscl | DER08_06170 | Not Available | Positive | 1315458 - 1315895 | 15927.8 |
| aspartate-semialdehyde dehydrogenase | DER08_06175 | Not Available | Positive | 1316005 - 1316994 | 35894.3 |
| hypothetical protein | DER08_06180 | Not Available | Positive | 1317089 - 1317436 | 13087.8 |
| tonb-dependent receptor | DER08_06185 | Not Available | Positive | 1317496 - 1319703 | 81083.1 |
| hypothetical protein | DER08_06190 | Not Available | Positive | 1319812 - 1320291 | 18179.9 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DER08_06195 | Not Available | Positive | 1320383 - 1321057 | 26123.3 |
| lysine transporter lyse | DER08_06200 | Not Available | Positive | 1321120 - 1321755 | 23518.8 |
| cysteine methyltransferase | DER08_06205 | Not Available | Positive | 1321763 - 1322095 | 12510.0 |
| chromosome partitioning protein | DER08_06210 | Not Available | Positive | 1322268 - 1323395 | 40205.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
