Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yiha family ribosome biogenesis gtp-binding protein | DER08_06065 | Not Available | Negative | 1289408 - 1290028 | 23680.4 |
| alpha/beta hydrolase | DER08_06070 | Not Available | Negative | 1290048 - 1290821 | 29008.0 |
| division/cell wall cluster transcriptional repressor mraz | DER08_06075 | Not Available | Positive | 1291122 - 1291595 | 17722.5 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | DER08_06080 | Not Available | Positive | 1291582 - 1292478 | 34278.9 |
| s-adenosyl-methyltransferase | DER08_06085 | Not Available | Positive | 1292487 - 1292834 | 13612.0 |
| penicillin-binding protein | DER08_06090 | Not Available | Positive | 1292825 - 1294825 | 74469.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DER08_06095 | Not Available | Positive | 1294822 - 1296285 | 53789.7 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DER08_06100 | Not Available | Positive | 1296292 - 1297521 | 45094.1 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DER08_06105 | Not Available | Positive | 1297522 - 1298856 | 49613.4 |
| cell division protein ftsw | DER08_06110 | Not Available | Positive | 1298887 - 1300188 | 47953.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
