Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DER08_05965 | Not Available | Negative | 1270925 - 1271380 | 17335.1 |
| Trna-gly | Not Available | Not Available | Positive | 1271553 - 1271628 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1271671 - 1271743 | Not Available |
| dipeptidase pepe | DER08_05980 | Not Available | Negative | 1271777 - 1272484 | 26061.3 |
| hypothetical protein | DER08_05985 | Not Available | Positive | 1272626 - 1273360 | 27633.7 |
| hypothetical protein | DER08_05990 | Not Available | Positive | 1273417 - 1273920 | 19260.6 |
| aminopeptidase | DER08_05995 | Not Available | Positive | 1273977 - 1276220 | 85497.0 |
| sec-independent protein translocase tata | DER08_06000 | Not Available | Positive | 1276330 - 1276731 | 14356.2 |
| phosphatase pap2 family protein | DER08_06005 | Not Available | Positive | 1276731 - 1277297 | 22013.5 |
| methyltransferase | DER08_06010 | Not Available | Negative | 1277274 - 1277915 | 24510.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
