Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonylcarbamoyl-amp synthase | DER08_00555 | Not Available | Negative | 114311 - 115273 | 35366.8 |
| hypothetical protein | DER08_00560 | Not Available | Negative | 115280 - 116116 | 31578.0 |
| hypothetical protein | DER08_00565 | Not Available | Negative | 116116 - 116394 | 10731.0 |
| lysr family transcriptional regulator | DER08_00570 | Not Available | Positive | 116682 - 117605 | 34623.1 |
| hypothetical protein | DER08_00575 | Not Available | Negative | 117602 - 118798 | 45939.7 |
| superoxide dismutase | DER08_00580 | Not Available | Negative | 118916 - 119440 | 18268.7 |
| acyl-coa dehydrogenase | DER08_00585 | Not Available | Negative | 119585 - 121375 | 66059.2 |
| acetyl-coa c-acyltransferase | DER08_00590 | Not Available | Negative | 121416 - 122597 | 41840.4 |
| 3-hydroxyacyl-coa dehydrogenase | DER08_00595 | Not Available | Negative | 122650 - 125040 | 88164.9 |
| marr family transcriptional regulator | DER08_00600 | Not Available | Negative | 125024 - 125491 | 17608.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
