Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase gale | DER08_05865 | Not Available | Positive | 1247155 - 1248168 | 36883.0 |
| peptidase m23 | DER08_05870 | Not Available | Negative | 1248165 - 1248836 | 24671.2 |
| [acyl-carrier-protein] s-malonyltransferase | DER08_05875 | Not Available | Negative | 1248914 - 1249786 | 30863.3 |
| hypothetical protein | DER08_05880 | Not Available | Negative | 1249852 - 1250568 | 27155.9 |
| hypothetical protein | DER08_05885 | Not Available | Negative | 1250581 - 1250904 | 11806.4 |
| peptidase u32 | DER08_05890 | Not Available | Negative | 1250922 - 1252784 | 70827.1 |
| aspartate aminotransferase | DER08_05895 | Not Available | Negative | 1253007 - 1254194 | 43196.6 |
| acyl-coa desaturase | DER08_05900 | Not Available | Negative | 1254256 - 1255353 | 42696.8 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DER08_05905 | Not Available | Positive | 1255459 - 1256088 | 23926.1 |
| 1-pyrroline-5-carboxylate dehydrogenase | DER08_05910 | Not Available | Negative | 1256194 - 1257819 | 59546.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
