Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_05765 | Not Available | Positive | 1224805 - 1225152 | 12566.4 |
| trigger factor | DER08_05770 | Not Available | Positive | 1225264 - 1226589 | 49618.2 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | DER08_05775 | Not Available | Positive | 1226717 - 1227391 | 24820.1 |
| atp-dependent clp protease atp-binding subunit clpx | DER08_05780 | Not Available | Positive | 1227470 - 1228702 | 45516.4 |
| phosphoserine phosphatase serb | DER08_05785 | Not Available | Positive | 1228862 - 1230097 | 45411.0 |
| hypothetical protein | DER08_05790 | Not Available | Positive | 1230333 - 1230803 | 17429.7 |
| hypothetical protein | DER08_05795 | Not Available | Negative | 1230924 - 1232435 | 58181.3 |
| duf2797 domain-containing protein | DER08_05800 | Not Available | Positive | 1232533 - 1233327 | 30378.7 |
| signal peptide peptidase sppa | DER08_05805 | Not Available | Negative | 1233373 - 1235133 | 65035.6 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DER08_05810 | Not Available | Positive | 1235261 - 1236400 | 44064.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
