Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf420 domain-containing protein | DER08_05665 | Not Available | Positive | 1204639 - 1205184 | 20192.7 |
| hypothetical protein | DER08_05670 | Not Available | Positive | 1205222 - 1205431 | 7651.51 |
| hypothetical protein | DER08_05675 | Not Available | Negative | 1205434 - 1206846 | 52543.9 |
| transporter | DER08_05680 | Not Available | Positive | 1207027 - 1208391 | 50340.2 |
| efflux rnd transporter periplasmic adaptor subunit | DER08_05685 | Not Available | Positive | 1208398 - 1209678 | 45890.3 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | DER08_05690 | Not Available | Positive | 1209685 - 1210359 | 24865.0 |
| thioredoxin domain-containing protein | DER08_05695 | Not Available | Negative | 1210334 - 1212358 | 78062.5 |
| hypothetical protein | DER08_05700 | Not Available | Negative | 1212415 - 1213314 | 33681.9 |
| hypothetical protein | DER08_05705 | Not Available | Positive | 1213433 - 1214416 | 37352.3 |
| gamma carbonic anhydrase family protein | DER08_05710 | Not Available | Positive | 1214437 - 1214952 | 18495.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
