Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell surface protein spra | DER08_05615 | Not Available | Positive | 1191065 - 1198225 | 267865.0 |
| glycine cleavage system protein gcvh | DER08_05620 | Not Available | Positive | 1198310 - 1198690 | 13730.0 |
| hypothetical protein | DER08_05625 | Not Available | Positive | 1198683 - 1199063 | 14429.0 |
| hypothetical protein | DER08_05630 | Not Available | Positive | 1199111 - 1200250 | 40634.1 |
| protoheme ix farnesyltransferase | DER08_05635 | Not Available | Positive | 1200337 - 1201239 | 33131.7 |
| cytochrome oxidase subunit iii | DER08_05640 | Not Available | Positive | 1201242 - 1201829 | 22354.1 |
| cytochrome oxidase subunit iii | DER08_05645 | Not Available | Positive | 1201873 - 1202850 | 36923.7 |
| cytochrome c oxidase subunit iv | DER08_05650 | Not Available | Positive | 1202872 - 1203222 | 13569.9 |
| hypothetical protein | DER08_05655 | Not Available | Positive | 1203301 - 1203942 | 24481.5 |
| sco family protein | DER08_05660 | Not Available | Positive | 1203953 - 1204636 | 25206.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
