Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit i | DER08_05515 | Not Available | Positive | 1159954 - 1161738 | 66423.8 |
| holliday junction branch migration dna helicase ruvb | DER08_05520 | Not Available | Positive | 1161826 - 1162848 | 37708.4 |
| trna epoxyqueuosine(34) reductase queg | DER08_05525 | Not Available | Positive | 1162859 - 1163779 | 34800.5 |
| laci family transcriptional regulator | DER08_05530 | Not Available | Negative | 1163786 - 1164808 | 38158.9 |
| alpha-glucosidase | DER08_05535 | Not Available | Negative | 1165036 - 1166787 | 67664.8 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | DER08_05540 | Not Available | Negative | 1166817 - 1167233 | 15944.2 |
| carbohydrate kinase | DER08_05545 | Not Available | Negative | 1167238 - 1168122 | 32016.2 |
| mfs transporter | DER08_05550 | Not Available | Negative | 1168125 - 1169453 | 49271.8 |
| glycosyl hydrolase family 32 | DER08_05555 | Not Available | Negative | 1169500 - 1171086 | 60334.2 |
| susc/raga family tonb-linked outer membrane protein | DER08_05560 | Not Available | Positive | 1171614 - 1174562 | 104631.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
