Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination/antitermination protein nusa | DER08_05465 | Not Available | Positive | 1145581 - 1146828 | 47307.5 |
| translation initiation factor if-2 | DER08_05470 | Not Available | Positive | 1146909 - 1149686 | 101137.0 |
| sporulation protein | DER08_05475 | Not Available | Negative | 1149741 - 1150127 | 14986.4 |
| cytochrome c | DER08_05480 | Not Available | Positive | 1150346 - 1151671 | 48360.2 |
| quinol:cytochrome c oxidoreductase | DER08_05485 | Not Available | Positive | 1151701 - 1154754 | 110065.0 |
| hydrogenase | DER08_05490 | Not Available | Positive | 1154792 - 1156192 | 53292.3 |
| duf3341 domain-containing protein | DER08_05495 | Not Available | Positive | 1156185 - 1156709 | 19958.1 |
| cytochrome c | DER08_05500 | Not Available | Positive | 1156718 - 1157260 | 20034.8 |
| quinol:cytochrome c oxidoreductase | DER08_05505 | Not Available | Positive | 1157295 - 1158746 | 55034.7 |
| cytochrome c oxidase subunit ii | DER08_05510 | Not Available | Positive | 1158767 - 1159924 | 42906.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
