Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium sp. |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | nasal discharge; natural spring |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Oscheius, Gymnogongrus flabelliformis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
673027 bp
Thymine Count
685544 bp
Guanine Count
374157 bp
Cytosine Count
361052 bp
Genome Length
2093788 bp
Protein-coding Genes
1898 genes
Non-Coding Genes
38 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DER08_05415 | Not Available | Negative | 1135465 - 1136121 | 24042.2 |
| elongation factor ts | DER08_05420 | Not Available | Negative | 1136238 - 1137062 | 29193.9 |
| 30s ribosomal protein s2 | DER08_05425 | Not Available | Negative | 1137173 - 1137970 | 29044.3 |
| 30s ribosomal protein s9 | DER08_05430 | Not Available | Negative | 1138139 - 1138525 | 14414.7 |
| 50s ribosomal protein l13 | DER08_05435 | Not Available | Negative | 1138525 - 1138980 | 16524.1 |
| laci family transcriptional regulator | DER08_05440 | Not Available | Positive | 1139281 - 1140309 | 38077.8 |
| dna polymerase i | DER08_05445 | Not Available | Negative | 1140350 - 1143178 | 106370.0 |
| phosphoesterase | DER08_05450 | Not Available | Positive | 1143323 - 1144558 | 47531.8 |
| thiol reductase thioredoxin | DER08_05455 | Not Available | Positive | 1144633 - 1144929 | 10982.4 |
| ribosome assembly cofactor rimp | DER08_05460 | Not Available | Positive | 1145067 - 1145567 | 18648.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gill diseases | Causes | PMC11294328 |
| Bacterial gill disease | Causes | PMC11294328 |
